Best TWAS P=1.34e-07 · Best GWAS P=5.96e-09 conditioned to 0.556
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | The Cancer Genome Atlas | Brain Lower Grade Glioma | CASKIN1 | 0.02 | 0.00 | blup | 38 | 0.01 | 0.04500 | 4.0 | -5.2 | 2.2e-07 | 0.45 | 0.03 | 0.04 | TRUE |
| 2 | The Cancer Genome Atlas | Thyroid Carcinoma | SLC9A3R2 | 0.06 | 0.03 | lasso | 5 | 0.03 | 0.00037 | -4.3 | 5.3 | 1.3e-07 | -0.59 | 0.11 | 0.54 | TRUE |